dsCheck — sensitive off-target search website for dsRNA-mediated RNAi [help] dsRNA Design page / dsRNA Verification page

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or Paste in a nucleotide sequence >sample sequence (Drosophila pou2; NM_078834.2, CDS) atgatggtgctacagcaacaacaacaacagcgtctctgggatgcaacaacaacgagcaacacaaatacacaaacacagcaatcggcgaatgtggaaagcacgccaacaaaagtttgccatcaggaaaatgcagcgacacacacatttatgcggcacatgtcgaactcaccaacaccgccctcgccactgcgttcgctatcagactgcggaaagagcttcgaggaggaggaactggagctgggcgagaactgcgagatgccacagaatctgagcagcaagcgccaggccagggaactagactctgagctggaaaacgaggtcctggatctggcaccgccaccgaagagattggccgaggagcaagaggaggaaaaggtggccagtgtcaatccaccacagcccgtggcatttgcaccggaggaaatgcatcaggctctgcaactgcagttgcacagctacatcgaaatggttcgccaattggcgccggaggcgtttcccaatcccaacctggccacgcagttcctgctgcagaactcactgcaagccttagcgcagtttcaggccctgcaacagatgaagcagcagcaaagggaggatcctctgcccagttactccacccccttggccaaatcaccactgagaagtccatccctgagtccggtgccccggcacagcaaatcccagcagcgaactccgccaaactcgatgactgccaattctctgggaatgagtagtgccgtgatgactccaaatacgcccagcatgcagcagcagccgcaactgcagcagagcactcccaagcccacgagtggactaactgtggcatctgccatggccaagctggaacaatcgccggaagagaccaccgatctggaggaactggaacagttcgccaagaccttcaaacagcggcgaatcaagctgggcttcacccagggcgatgtgggtctggccatgggcaaactgtatggcaatgacttctcgcagaccaccatttcccgcttcgaagccctcaatctgagcttcaagaacatgtgcaagctgaagccgctgctccagaaatggctggaggatgcggacagcacggtggccaagtcgggcggtggagtgttcaacatcaacacgatgaccagcacgctgagcagcacaccggaaagcatcctgggacgcagacgcaagaagcgcacctccatcgagaccacggtgcgcaccacgctggagaaggccttcctgatgaactgcaagcccacgtcggaggagattagccagctgtccgagcgcttgaacatggacaaggaggtgatccgggtgtggttctgcaatcgccgtcagaaggagaagcgcatcaatccctcgctggatctggacagtcccacgggcactccgctgagcagtcatgcctttgggtatccaccgcaggctctgaacatgtcccacatgcaaatggagggcggttcgggttccttctgcggcagttccatcagttcaggggaatag Drosophila melanogaster Caenorhabditis elegans Arabidopsis thaliana Oryza sativa Rattus norvegicus length: 100 200 300 400 500 600 [help]

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Reference: Naito,Y.*, Yamada,T.*, Matsumiya,T., Ui-Tei,K., Saigo,K. and Morishita,S. (2005) dsCheck: highly sensitive off-target search software for dsRNA-mediated RNA interference. Nucleic Acids Res. in press. * Joint First Authors.